 .          
 


      .  ,       ?

  ,        - GPT         .  ,       ,   ?

    ,    ,          Obsidian.      ,    Software 2.0,    -   ,           .

   ,      .           .          .





 

 .          





 1:  :      Obsidian.



:    (Vault)    LLM      .

 : Obsidian,  Ollama,  Software 2.0,  [[MOC_Prompts]].




    .         .


,     ,      ,            ,    ,    .  ,          ,       ,       ,           .   ,          .

              Obsidian,   ,      ,        .     ,          .



 :      

   ,      ,   .         ,   ,    -, ,   .       ,         ,   ,    .

    .    ,    ,               .

       .     .    ,             -   .

   .         .   ,      D    ,     ,    ,    ,  ,    .

   .        ,      .               ,       .

             .     ,    .   ,           ,     .



 :    

     (LLM  Large Language Models,   ChatGPT)       .  ,               .     -,         .   ,        .

,      ,   Ollama.  ,              .       ,     ,      .     ,          ,    .



 Software 2.0:    

    Software 2.0,        .    (Software 1.0)      .  Software 2.0      ,      .

    Obsidian      ,        .  ,   (    )    ,        .   ,    ,          (Vault)   MOC (Maps of Content)   .



 :    

   ,     ,        .          .



:    (iCloud/Google Keep)

 : .         ID.     .

 : .    ,   ,     .

 : .  ,             .



:       

 : .       .

 : .    ,    .

 : .   ,   .



:  Vault  Obsidian + Ollama

 : .      .   .   .

 : .      ,      .   (.md)       50 .

 : .  LLM    ,     ,   .



  :    

      ,     .         :

1.          ,     ? (  ,   ).

2.   ,        10  20 ,   ,        ? (  ,  Markdown  Obsidian   ).

3.      -,      ,         ? (  ,  Ollama   ).



 :   

           ,       .

 Obsidian.     .    ,        .     .

 Ollama.        (  Llama-3  Saiga)    .     .

  MOC (Map of Content).   ,     .    [[MOC_Prompts]],       -.



 :    

   ,  ,    .   ,    ,    .

           ,       :

1.     .

2.       .

3.       .

4.    .

5.     .

     :   .  ,  90%       .            ,    Vault.



  

   ,             .     ,   ,   5-10       .        ,     .         ,  Obsidian           .



   .       Software 2.0  ,        ,       .     ,       ,      ,       .




 Obsidian   Software 2.0


  -  ,            .    ,         Software 2.0 (  2.0).        ,    (Software 1.0),     ,       .     ,  Obsidian     ,        .



 Software 1.0  Software 2.0:  

,       .   Software 1.0      :    15 ,     5 ,  ,     180 .   ,        .   Software 2.0    .     ,    .    .    ()   .

      Obsidian           .      ,       ,   ,        .      ,      . Obsidian    ,          Markdown (.md).  ,       -  ,         (LLM),   .



 :    

      . ,        500 ,    :    .          D,     .        ,       ,   .

     ,     ,    .      ?

  .     ,      .        ,        .

  .      .  Obsidian   [[  ]],   .    ,         .

  .   (,     )    ( ).        ,    .



   RAG-

        RAG (Retrieval-Augmented Generation     ).   :       (:           ?),        .     Vault ()  Obsidian,           .

   , RAG-     ,    .      ,         .  ,  ,    ,      ,           .



[[MOC_Prompts]]: -   

 Obsidian   MOC (Map of Content)   . ,   Vault    .    .        . [[MOC_Prompts]]     ,         .

      ?        -.    ,    .          ,   [[MOC_Prompts]]     (Entry Point).

1. .    ,       .    MOC   .

2. .    ,   ,  ,     .

3. .     10  20  - (  ,   ,     ), MOC   ,     .



YAML-frontmatter:   

  Obsidian,     ,      ,   ,    YAML-frontmatter.        ,    .     .

          :

 type: prompt ( ,     ).

 version: 1.0 (  ).

 tags: [ai, setup, configuration] ( ).

 ,        :

---

type: prompt

version: 1.0

status: active

---

         ,      .       ,       prompt      .     :      ,    ,   .



  :  

    ,  ,     .  :    ,      .    ,     ?

  1:   .

:   .md    20  .   .

:    20   (,  D3.md,  .md).

  2:  .

:    ,      .

:   YAML-   .     type: prompt?

  3:  .

:  ,      ,        .

:   [[MOC_Prompts]]  ,       .



    

  ,  ,             .   ,     .

1.  YAML (: , ,  ).

2.   (  ).

3.  (    ).

4.   ( ,       ).

5.  (  [[MOC_Prompts]]    ).

    Obsidian Vault      Software 2.0.         ,   ,   . ,         ,  Obsidian         ,            .




   (  ):    


 ,        .           .      ,     .             Obsidian,         .



 1:      Ollama

,  Ollama          .       (LLM),   Llama-3  Saiga,        .     ,       .



    :

1.     ollama.com        (Windows, macOS  Linux).

2.    ,      .      (  )      .

3.        .   ( Windows     PowerShell,  macOS  ).

4.  : ollama run llama3.      4.7 .     .

5.         Saiga ( Llama-3   ).   ,  : ollama run saiga.

 ,   ?    : ,  ?.   ,     ,     , :    .          .



 2:    Obsidian (Vault)

  ,     .  Obsidian    Vault ().    ,   .

1.  Obsidian   Create new vault.

2.   Bio_Base.    ,         .

3.     .     Software 2.0,        :

 00_System        .

 01_MOCs      (Map of Content).    .

 02_Prompts       ().

 03_Data     : ,   .

 04_Knowledge     ,   .

     :         .         .



 3:  [[MOC_Prompts]]    

  Software 2.0     ,      .  [[MOC_Prompts]]        -.    01_MOCs     MOC_Prompts.md.

    ,  YAML- ()   :

---

type: index

version: 1.0

topic: AI_Management

---

#    (MOC_Prompts)

       ,     .        .

 [[Prompt_Analysis_Biomarkers]]    .

 [[Prompt_Nutrient_Check]]    .

 [[Prompt_Daily_Log_Summary]]    .



  ?       ,       . [[MOC_Prompts]]   ( )       .



 4:     [[Audit_Log.md]]

        .     00_System   Audit_Log.md.    .  ,        ,     .

 Audit_Log    (   ):

#    (Audit Log)

|  |  () |  (ID) |   (1-10) |    |

| :--- | :--- | :--- | :--- | :--- |

| 2026-10-27 | 1.0 | Initial_Setup | 10 |   . |



   .     ,       ,   Audit_Log  ,    (     )  .       .



 5:     [[MOC_Nutrients]]  [[MOC_Biomarkers]]

  ,        ,      01_MOCs.

1.   [[MOC_Nutrients]].      .      ,  D  .

2.   [[MOC_Biomarkers]].     .      ,      .

   ,      .   ,    (),      ().         .



 :    

          02_Prompts.   Prompt_System_Architect.md.     .    ,      ,   .

    md :



---

type: prompt

version: 1.0

status: active

---

# :   

:         .       ,     LLM.

  :

      ,  :

1.  (   ).

2.  (   ).

3.  (  ).

4.   (    : , , Markdown).

: [[MOC_Prompts]]

  :

 Ollama  ,       Ȼ (   )    .  :                 . ,       ,    .

   

 ,     :

1.  :    .   Ollama   .      .

2.  :  Obsidian  Ctrl ( Cmd)     [[MOC_Prompts]]   .  Obsidian         .

3.  YAML: ,      (---)     .   ,       .



 :  

  ,  Saiga    (     ),    .     .   ,     , , `ollama run phi3`.   ,       .

   .      ,       .  Obsidian           ,      .                    .







 ,   .   ,     ,       .         ' '.

          .      ,       ,      (      )      .  ,         ,    .

   ,    ,     Software 2.0,       .



 :     Vault

       Obsidian       .    ,    .      (Map of Content  MOC),       .

  [[MOC_Prompts]]:      .   ,           .       ,   .     (version: 1.0)   (type: prompt),      ,      .

  [[Audit_Log.md]]:     .   ,         .   ,   ,   .   ,          .

  [[MOC_Nutrients]]  [[MOC_Biomarkers]]:       .     .           , ,    ,     .



   Software 2.0:   

        Software 2.0,       (     ).    (Software 1.0)      :  ,   .        .

       ,      . ,       LEGO.          (     ),         .     (   D,    ,  )       ,          .

     RAG (Retrieval-Augmented Generation).      :    ?,    .       ,        [[MOC_Biomarkers]]     [[Audit_Log.md]],   ,  .




 :   


        ,   ,       .      .



 1:   (YAML-).

  [[MOC_Prompts]]. ,      (  )   .    :

---

type: index

category: logic

status: active

---

        (     Obsidian), ,   .    ,       ,      .



 2:     .

     `ollama list`. ,       (, llama3  saiga).  ,           .



 3:  .

      .   :   [[MOC_Biomarkers]].               ,       .



 :  

     .  ,   ,   .

 :        .

: Obsidian     .     ,    , ,       `[[...]]`.          .          MOC-.

 :        .

:  ,      (RAM).             (, `phi3`  `llama3`).    ,    ,      .



   :  

,     ,          .         .

  ? ,       .      :  130,  15.       .         float (   ).

          ,     .  :

1.         Obsidian.

2.  YAML-     (, `glucose: 5.2`).

3.  -,     ,           .



     2

         (  ,    ).      ,          .

  :

   Vault    02_Biomarkers.

    Archive (    ).

    Data (        ).

         .          . ,    ,  Ollama .     .



   :

1.     LLM  ChatGPT   ? (:        ).

2.       ? (:      ,     ).

3.     [[Audit_Log.md]]? (:           ).

  .      .




 2:     :  .



:  baseline-     ' '      PubMed.

 :  ,  Chain of Thought (CoT),  YAML frontmatter,  ' '.




       .    (, )    .




,        ,       .     ,         : "  "  "  ".   ,        ? , .          ,     " "   .          ,    ,    Obsidian     .



 "":      

     ,       " "  .     .  ,       ,     .      ,          .

:      ? ,    .  , ""      "  "  " ".     ,        ,   .    "  " ,    .

,   D  30 /     .   ,              6080 /.   "  "  "" ,      .        ,         Baseline.



Baseline:   

Baseline ( )            .    " ".    ,    ,          .       ,          .

   Baseline     :

1.  :    (, , ).  ""     .

2.   (): ,    .        ().  ""  .



  :   " "

   ()  , ,        45+.    .       .        .

   ,    ,        .   ""  .

     ,      ,      .

   ( , REM-,  )  ,    " "    .  Obsidian        :           .



 ' ':    

      .     ,     ,    "", ""  "- ".     , -  PubMed          .

     -  .       . , "  "     `Blood Glucose`,             LOINC (Logical Observation Identifiers Names and Codes).

 " "   ,      (Ollama),    ,     .           " ",  :

   .

     (Medical Subject Headings  MeSH).

   (   ,         ).

    .

   Obsidian      PubMed ,     ,    ,     " " .



 :     

   ,     Chain of Thought ( )    .      " ".     :

1.   (   ?).

2.   (    ?).

3.     (     ?).

4.     YAML ( Obsidian ,     ,   ).



 YAML frontmatter  

      Obsidian      ,    "".   YAML frontmatter.    ,    :

title:   

type: biomarker

value: 5.4

unit: mmol/l

international_name: Plasma Glucose

loinc_code: 2339-0

date: 2026-10-25

status: baseline

              .     PDF-        .



 :    

 .    (48 )    50 PDF-    5 .   ,   : "  ,  ".

   , :

1.  PDF  " ".

2. ,   ""  ( )    ,       .

3.   ,       2   ,      .

4.      PubMed         45+.

   ""   "  ".        45+.

       ,    Obsidian    " "    ,  ,   .     [[Audit_Log.md]]      .



  :   

    , ,      :

     (  PDF   ).

     (Apple Watch, Oura, Garmin        )       7 .

  Obsidian Vault,    1.

     .       ,    .       " ".



 " " (Chain of Thought)

  " "   ,     -.         ( ). CoT       .

    :

"      .   ,        .  ,    .         PubMed".

  ,        ,    .     ,     ,      .



 :     

,    1        Ollama.        .     ,      .    " "     .       ,           .

     ?    " "    .




  


    ,          ,             .       .     ,       ,      ,    .



  :    

,       Lego,    .        .     - :    , -  , -  .         ,    ,   ,    .

  (Digital Twin)      ,     .             .        Obsidian.

  ?

 :   ,          (     ),      ,       .

  :       ,   ,         .

   :          ,    10       .

        (, PDF-)   .          .



    

    PDF-     .   ,   140   ,   90      .    :     ,   .

       ,    .      :

1.  (Extraction):      .

2.  (Contextualization):   ,    ,             (,    ).

3. :        (),     ,  ,     ,     (  )       (  ).



  :     

      .    ,       ,      PubMed  . ,     - .           ,     .      ,    C-Reactive Protein  CRP.

        LLM (Large Language Model),      .     :

 LOINC (Logical Observation Identifiers Names and Codes):  -      .           LOINC (, 2345-7).       ,        ,        .

 SNOMED-CT:      .     . ,      .

   :

   ,  `[[Prompt_Bilingual_Bridge]]`     .     (RU),      (LOINC)      (EN).     Obsidian  ,    ,     ,    PubMed.



 YAML:    

 Obsidian      ,   YAML- (YAML frontmatter).        ,     ,       .

      Obsidian     .  ,    :

---

type: biomarker

id: loinc_code_here

name_ru: 

name_en: Glucose

value: 5.4

unit: mmol/L

date: 2026-10-25

reference_range: [3.3, 5.5]

tags: [blood_analysis, metabolism]

---

      ?

 `type: biomarker`:              .

 `value: float`:  ,      ().          Obsidian.

 `unit: string`:    .  100    (mg/dL)  100   (mmol/L)        .      .

 `date: YYYY-MM-DD`:   ,        .



 [[Audit_Log.md]]    

      .  ,       ,     .      `[[Audit_Log.md]]`.

     .   ?

-,   .       (,  8  0).    ,        ,     .

-,    .  ,           .

   `[[Audit_Log.md]]`:

 : 2026-10-25

 :  PDF ___.pdf

 : Ollama + Llama 3 ()

 : .  12 .

 :   D      (/   /).



  :   

       ,     .       (Garbage In  Garbage Out).

1.  :  ,   YAML- .         .

2.   (Range Check):    ,       (,  500   ),      .

3.   :  ,       LOINC.         ,   .

      Obsidian       - ,      .           ,       .



 :      

 ,      . ,       :    6.2 / (  5.2).

    :

  1 ():        6.2.

  2 ():     Total Cholesterol.

  3 ():    LOINC: 2093-3.

  4 ():  YAML-,  `value: 6.2`,  `status: high` (    ).

  5 ():  `[[Audit_Log.md]]`           .

      .      ,         ,      PubMed.         .




   (  ):     


        ,        .       ,         ,     .      :  [[Prompt_Blood_Analysis]]     [[Prompt_Bilingual_Bridge]]        .          Obsidian,      .



 Chain of Thought ( ):   

     ,    Chain of Thought (CoT). ,         .     ,    ,    .          ,  ,     . CoT     .     :      ,  ,   ,          .



  [[Prompt_Blood_Analysis]]

    ,     (,   PDF   )    Markdown    YAML.          Obsidian   [[Prompt_Blood_Analysis]].



 [[Prompt_Blood_Analysis]]:

          .  :            Markdown,   Obsidian.

  Chain of Thought:

1.       ,  ,     .

2.      .     ,     .

3.      (,     5000).

4.       Markdown       YAML-.

 YAML-   :

---

type: biomarker

name_ru: "  "

value: []

unit: " "

date: YYYY-MM-DD

reference: " "

status: "normal/high/low"

---

  :

    ,   status  "high".

     "low".

     "normal".

   ,     .

  :

   : , 20  2026,  6.5 / ( 3.3-5.5),   :

---

type: biomarker

name_ru: ""

value: 6.5

unit: "/"

date: 2026-05-20

reference: "3.3-5.5"

status: "high"

---



 [[Prompt_Bilingual_Bridge]]:   

    ,       PubMed   .              ,    .            ,   LOINC (Logical Observation Identifiers Names and Codes).



 [[Prompt_Bilingual_Bridge]]:

        LOINC.          .

   :

1.      ,    .

2.   LOINC ( ).

3.   .

 :

  : []

 English Term: [Name]

 LOINC Code: [Code]

 PubMed Search Query: [    PubMed]

:

  :  

 English Term: Hemoglobin A1c (HbA1c)

 LOINC Code: 4548-4

 PubMed Search Query: "Hemoglobin A1c" OR "HbA1c" AND "reference range"



   [[MOC_Prompts]]

,      ,      Obsidian. MOC (Map of Content)    ,      .   [[MOC_Prompts]]     :

1.  

 [[Prompt_Blood_Analysis]]:      PDF  .       YAML.

 [[Prompt_Bilingual_Bridge]]:         LOINC.

2.  

 [[Prompt_Trend_Analysis]]: (    )     .

        ,     .          LLM (,  Ollama    ).



 [[MOC_Biomarkers]]  

 [[MOC_Biomarkers]]      .      ,    .           .

  [[MOC_Biomarkers]]:

1.  

 [[Biomarker_Glucose]]:   .

 [[Biomarker_HbA1c]]:  .

2.  

 [[Biomarker_Cholesterol_Total]]:  .

 [[Biomarker_HDL]]:    ().

       [[Prompt_Blood_Analysis]],       (, [[2026-10-25_Blood_Test]]),     .     [[MOC_Biomarkers]]  ,    .



    [[Audit_Log.md]]

   .          ,   ,   .     [[Audit_Log.md]] ( ).        .

   [[Audit_Log.md]]:

 2026-11-15 14:00:      2026-10-20.  [[Prompt_Blood_Analysis]].  12 .    .

 2026-11-15 14:10:  [[Prompt_Bilingual_Bridge]]   .   LOINC  10 . 2  ( )   .



 :   

   . ,      ,  :   15 /.

1.  :    LLM (,  -,     Obsidian).

2.  :     [[Prompt_Blood_Analysis]]     .

3.  :        15 /,  12  2026 .

4.  :  YAML-      Obsidian   [[2026-05-12_Ferritin]].

5.  :  [[Prompt_Bilingual_Bridge]]   .    "Ferritin"   LOINC 2276-4.

6.  :      [[Biomarker_Ferritin]].

7.  :    [[Audit_Log.md]]   .



  

      ,    (Spot Check).      .

  : 6,5  65        .

   : /  /    . ,     ,    .

  :   ,  ,    .



  

,       ,    .       .      .  (Blood_Analysis)        .  (Bilingual_Bridge)          ,        .  Obsidian    ,  Audit_Log   ,   , ,     .

     .      ,   ,    .             PubMed,     ,    ,       .



-     :

           YAML.

      (high/low/normal).

    (, , )   .

   [[Audit_Log.md]]     .

  [[MOC_Prompts]]  [[MOC_Biomarkers]]   .

  .           .     ,      .     ,      ,        .




:      


        .          ,        .                YAML.  ,           ,   :  ,  ,    .

        .   ,    D  30 /,         .       ,     ,     .  ,        ,               PubMed.

PubMed    ,       35    .   :       ,         .            ,    Obsidian        .




 :   


   ,     Obsidian    [[Bridge_Dictionary.md]].        .        .      LLM    .

  ,        [[MOC_Prompts]].         -.



 [[Prompt_Bilingual_Bridge_Logic]]

:          PubMed.            .

 :    YAML- .

 :

1.      .

2.        (  MeSH).

3.     ,     (, /  /).

4.     PubMed,    (AND, OR)   (Clinical Trial, Meta-Analysis).

 :

 :  .

 : HbA1c / Glycated Hemoglobin.

 PubMed Query: "Glycated Hemoglobin"[Mesh] AND "Reference Values"[Mesh] AND "Adult"

       ,    [[MOC_Biomarkers]].



    PubMed

,      ( ),       PubMed    Obsidian.           .       :  ,  (Abstract)   .

      .       ,         YAML-.       ,  Smart Connections      .

      Obsidian   :

---

type: research_paper

source: PubMed

pmid: 12345678 (  )

biomarker_linked: "HbA1c"

evidence_level: "Meta-Analysis" ( Clinical Trial)

relevance_score: 0.9 (    )

---



 :     

 PubMed      (,   ,      ).        Human Only.       ,          510 .

  ,      :

  1: -    (  ).

  2:    ().

  3:  .

         ,       .     ,    ,    .



   Smart Connections

     .     .   (Smart Connections)   .         ,      PubMed  hyperglycemia,     . Smart Connections  .

   ?  Smart Connections   (embeddings)    .        (),        .   PubMed         .

  Smart Connections     ,   :

1.    Smart Connections       (,  Ollama,      1).

2.      .

3.   Smart View. ,         ,           PubMed,    .

    .     ,    : ,  ,  ,       -        15%,     .



:    PubMed  Smart Connections

   .   45     : 5.8 /.       (    6.1).

 1:      : "Fasting glucose 5.8 mmol/L" AND "mortality risk" AND "age 45-60".

 2:     PubMed,  ,     45       5.2,    5.6       .

 3:       Obsidian.

 4: Smart Connections    `Glucose_2026-10-12.md`   `PubMed_High_Normal_Glucose.md`.     .

 5:    MOC_Biomarkers,       ( ),  ,     .     .



 :    

             (,    D)       .

1.     .

2.   [[Prompt_Bilingual_Bridge_Logic]],    .

3.        PubMed (   Obsidian    PubMed).

4.   ,     ,    YAML-,   .

5. ,   Smart Connections       .

           .      ,      .         ,       .



   

         .   ,      .            .        :       +    ,   ,        .

       .        . ,    YAML-  ,  Smart Connections  .    :  Obsidian    -  ,       ,       .



   :

            MeSH?

     Obsidian     `type: research_paper`?

   Smart Connections  (Connections)   ,     ?

          .       .  ,       ,     ,        .




 3:  :     .



:   Ingestion ( PubMed)    RAG- Smart Connections   .

 : PubMed Ingestion,  ' ',  Smart Connections,  [[Retrieval_Quality_Check]].




  .


   .

   ,     (https://www.litres.ru/pages/biblio_book/?art=74069506)  .

      Visa, MasterCard, Maestro,    ,   ,     ,  PayPal, WebMoney, ., QIWI ,       .


